Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANLSELPNIGKVLEQDLIKAGIKTPAELKDVGSKEAFLRIWENDSSVCLSELCALEGAVQGIRWHDLDEAKKSELKKFHQSL
2ZYH Chain:A ((379-416))
----------------------------------------VYVNGVNVCTERICPIERAVNGLWVFDRGADGKSDLDR-----
General information:
TITO was launched using:
RESULT:
Template:
2ZYH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14486 for 156 contacts (-92.9/contact) +
2D Compatibility (PS) -3717 + (NN) 786 + (LL) 3256
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -18361.0 ( -117.70 by residue)
QMean score : 0.275
(partial model without unconserved sides chains):
PDB file :
Tito_2ZYH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZYH-query.scw
PDB file :
Tito_Scwrl_2ZYH.pdb
: