Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------MNFNFFVRSGFIGLILLFVIQVLGIIRGLLIQSGFMDGSIDQ---TLLGTKLIIVPIIFFTISVIFFLLWFYKDYQKSRFPN---
2HFV Chain:A ((1-97))
MGSSHHHHHHSSGRENLYFQGHLRELLRTNDAVLLSAVGALLDGADIGHLVLDQNMSILEGSLGVIPRRVLVHEDDLAGARRLLTDAGLAHELRSDD
General information:
TITO was launched using:
RESULT:
Template:
2HFV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76846 for 488 contacts (-157.5/contact) +
2D Compatibility (PS) -8293 + (NN) -1836 + (LL) 0
1D Compatibility (HY) 800 + (ID) 550
Total energy: -86725.0 ( -177.72 by residue)
QMean score : 0.192
(partial model without unconserved sides chains):
PDB file :
Tito_2HFV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HFV-query.scw
PDB file :
Tito_Scwrl_2HFV.pdb
: