Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLYIIANPHAGNKNASTIVGKIQELYHTED--ISVFYTEQKDDEKKQVINILRSFKESDHLMIIGGDGTLSKVMTYLP---QHIPCAYYPVGSGNDFARALKIPN-LKETLTAIQTERLKEINCFIYDKGLILNSLDLGFAAYVVWKASNSKIKNILNRYRLGKITYIVIAIKSLLHSSKVQVLVEGETGQQIKLNDLYFFALANNTYFGGGITIWPKASALTAELDMVYAKGHTFLKRLSILLSLVFKRHTTSKSIKHQTFKAMTVYFPKNSLIEIDGEIVELDQISLKCQKRYLYM |
2QV7 Chain:A ((25-313)) | KRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIGDATLEAERAM--HENYDVLIAAGGDGTLNEVVNGIAEKPNRPKLGVIPMGTVNDFGRALHIPNDIMGALDVIIEGHSTKVDIGKMNNRYFINLAAGGQLTQ-------------------GPFAYYIKGFEMLPQMKAVDLRIE-YDGNVFQ-GEALLFFLGLTNSMAGFEKLVPDAKLDDGYFTLIIVEKSNLAELGHIMTLASRGEHTKHPKVIYEKAKAINISSFTDLQLNVDGEYGGKLPANFLNLERHIDV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QV7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191207 for 2298 contacts (-83.2/contact) +
2D Compatibility (PS) -28748 + (NN) -3356 + (LL) 1708
1D Compatibility (HY) -5600 + (ID) 2650
Total energy: -229853.0 ( -100.02 by residue)
QMean score : 0.464
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