Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVSQTYGLVLYNRNYREDDKLVKIFT---ETEGKRMFFVKHASKS-KFNAVLQPLTIAHFILKINDNGLSYIDDYKEVLAFQETNSDLFKLSYASYITSLADVAISDNVADAQLFIFLKKTLELIEDGLDYEILTNIFEVQLLERFGVALNFHDCVFCHRVGLPFDFSHKYSGLLCPNHYYKDERRNHLDPNMLYLINRFQSIQFDDLQTISVKPEMKLKIRQFLDMIYDEYVGIHLKSKKFIDDLSSWGSIMKSD |
| 4QOY Chain:A ((360-441)) | ------------NRGGHDPKKIYAAFKKAQETKGKATVILAHTIKGYGMGDAA----IAHQVKKMNMDGVRHIRDRFNVPV---SDADIEKLPYITFPEGSEEHTYLHAQRQKLHGYLPSRQPNFTEKLELPSLQDFGALLEEQSKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGYKEDEKGQILQEGINELGAGCSWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QOY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -771 for 352 contacts (-2.2/contact) +
2D Compatibility (PS) -7235 + (NN) 3231 + (LL) 1764
1D Compatibility (HY) -2400 + (ID) 1150
Total energy: -6561.0 ( -18.64 by residue)
QMean score : 0.110
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