Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASGEKAKIQRKKSGAWSMTYKTLDGNVVATFRPMFKKTGSHCYISTSKMTKSDGNNNFSIQIYYKGTSNVKIKMFDDNPEHTMQFSKKKFANNMLNRDESTTNHSYDKVLEGDLTPFMGQFSSDSFNQTIVDSGMTYGGYEPKDYYEGRTTVFPAITKTGYWNGITSHGSYVIKNDDLPKKIKNYYEIHVYGANSGAINSTGSLKRIFYLVPPKVEGPDGKVLSKRQVFEVGANNQLISLSYQSPDWWKRYKKSGLEKDLDVDAIYRGDFSSLKGTWRNGKGEVLTIN---DDGSTDDGERISIGSTEKSRLPSVGMSSGNFGVSVYLFQIGVSNPYIENGHTSDTTRPRLAIGLNPGDFPTDAYYYRY |
2C4I Chain:A ((80-108)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CSLTGKWTNDLGSNMTIGAVNSRGEFTGTYITAVTATSNEIKESPLHGTQNTIGSTTVFTGQCFIDRNGKEVLKTMWLLRSSVNDIGDDWKATRVGINI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C4I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2831 for 95 contacts (29.8/contact) +
2D Compatibility (PS) -3089 + (NN) -3005 + (LL) 12260
1D Compatibility (HY) -1200 + (ID) 450
Total energy: 7347.0 ( 77.34 by residue)
QMean score : 0.430
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