Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKHFGSKVRNLRVTRNITREDFCGDETELSVRQLARIESGQ------SIPNLTKAHYIAKQLNVKLDILTGGESLELPKRYKELKYKLLRTPTYGDANRLAVREAYFDEIYEVFYEELPEDERLIIDCMQSKLDVHFSVNDNFGITILHDYFDQIKKKKEYTTNDFVMIDLYLLCFSINYGMKSLYSLENYHFIMSKLLEQDNLLPEDNFQLNNVLLNHVELAFQFKQKKYVQQIIHRSNAIMTEIHDFQKRPILSLIEWKYLLIIEKDRTKAETCFKQSILFAELIGDLYLKGKLIEEWNKDLT |
3FYM Chain:A ((2-74)) | --KTVGEALKGRRERLGMTLTELE-QRTGIKREMLVHIENNEFDQLPNKNYSEGFIRKYASVVNIEPNQLIQAHQDEIPSNQAEW----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FYM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -14662 for 450 contacts (-32.6/contact) +
2D Compatibility (PS) -6928 + (NN) -623 + (LL) 18768
1D Compatibility (HY) -400 + (ID) 550
Total energy: -4395.0 ( -9.77 by residue)
QMean score : 0.490
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