Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVRPSVKPICEYCKVIRRNGRVMVICPTNPKHKQRQG
2MLP Chain:? ((1-26))
MELKAS------------EFGVVLSVDALKLSRQSPLG
General information:
TITO was launched using:
RESULT:
Template:
2MLP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2602 for 90 contacts (28.9/contact) +
2D Compatibility (PS) -2657 + (NN) -1556 + (LL) 1188
1D Compatibility (HY) -1200 + (ID) 250
Total energy: -1873.0 ( -20.81 by residue)
QMean score : 0.295
(partial model without unconserved sides chains):
PDB file :
Tito_2MLP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2MLP-query.scw
PDB file :
Tito_Scwrl_2MLP.pdb
: