Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAYRKLGRTSSQRKAMLRDLTTDLLINESIVTTEARAKEIRKTVEKMITLGKRGDLHARRQAAAYVRNEIASENYDEASDKYTSTTALQKLFDDIAPRYAERNGGYTRILKTEPRRGDAAPMAIIELV
2ZJQ Chain:K ((6-115))
-AGRKLNRNSSARVALARAQATALLREGRIQTTLTKAKELRPFVEQLITTAKGGDLHSRRL--------VAQDIHDK--------DVVRKVMDEVAPKYAERPGGYTRILRVGTRRGDGVTMALIEL-
General information:
TITO was launched using:
RESULT:
Template:
2ZJQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19182 for 750 contacts (-25.6/contact) +
2D Compatibility (PS) -12552 + (NN) -7176 + (LL) 1512
1D Compatibility (HY) -6400 + (ID) 2850
Total energy: -46648.0 ( -62.20 by residue)
QMean score : 0.610
(partial model without unconserved sides chains):
PDB file :
Tito_2ZJQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZJQ-query.scw
PDB file :
Tito_Scwrl_2ZJQ.pdb
: