Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMTVYFDGNFWLGLIEYDDDGDYKVFRYFFGKEPKDDDVFNFINHKLNDLIKKYEFVKTDISLKRTNEHKKSPKRMQREINREKRKPVVSTKAQLAMKTIHMSIKNERQLSQKCKKNELRKHRYQLKQEKRYQKKKGH
2OJL Chain:A ((50-85))
------------GGVFRIHYNGAPLWDREVDGGFPEAKVLKQRVRDHL-------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2OJL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3293 for 177 contacts (-18.6/contact) +
2D Compatibility (PS) -3688 + (NN) -1773 + (LL) 7988
1D Compatibility (HY) -400 + (ID) 300
Total energy: -1466.0 ( -8.28 by residue)
QMean score : 0.196
(partial model without unconserved sides chains):
PDB file :
Tito_2OJL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OJL-query.scw
PDB file :
Tito_Scwrl_2OJL.pdb
: