Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKRFSLLNFIVVTFIFFFFILFPLLNHKGKVDANSRQSVTYTKEEFIQKIVPDAQDLGKSYGIRPSFIIAQAALDSDFGEKILANKYHNLFGLLAEPGTPSITLNDSSTGKKQEKQFTHYKSWKYSMYDYLAHIKSGA----TGKKDSYTIMVSVKNPKTLVQKLQDSGFDNDK-KYAKKMTEIIDLYDLTRYDK |
2A1T Chain:R ((275-330)) | ----------------------------------------------------------------------------------------------------------------------------------YIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEILKKK------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A1T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 522 for 311 contacts (1.7/contact) +
2D Compatibility (PS) -5564 + (NN) -3897 + (LL) 9148
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -3241.0 ( -10.42 by residue)
QMean score : 0.362
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