Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVFNKLFKRRHSVSEEIKKDDLQEEVEATETEETVEEVIEEIPEKSELELANERADEFENKYLRAHAEMQNIQRRSSEERQQLQRYRSQDLAKAILPSLDNLERALAVEGLTDDVKKGLEMTRDSLIQALKEEGVEEVEVDSFDHNFHMAVQTLPADDEHPADSIAEVFQKGYKLHERLLRPAMVVVYN |
| 1WDT Chain:A ((174-240)) | --------------------------------------------------------DVFHGKAYRYENGEEREAEVPPEERERVQRFR-QEVLEAIVET---------DEGLLEKYLEGEEVTGEALEKAFHEAVRRGLLYPVALASGEREIGVLPLLELILEALPSPTERFGDGPPLAKVFKVQVDPFM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WDT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9112 for 348 contacts (-26.2/contact) +
2D Compatibility (PS) -7105 + (NN) -1083 + (LL) 6228
1D Compatibility (HY) -2400 + (ID) 1100
Total energy: -14572.0 ( -41.87 by residue)
QMean score : 0.363
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