Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFGKKLGFLALLMSIVLILGACGKTGLGNSTGNSTKNVTKKSAKNLKLGVSISTTNNPYFVAMKDGIDKYA---SNKKISIKVADAQDDAARQADDVQNFISQNVDAILINPVDSKAIVTAIKSANNANIPVILMDRGSEGGKVLTTVASDNVAAGKMAADYAVKKLGKKAKAFELSGVPGASATVDRGKGFHSVAKSKLDI--LSS-QSANFDRAKALNTTQNMIQGHKDVQIIFAQNDEMALGAAQAVKSAGLQNVLIVGIDGQPDAHDAIKKGD---ISATIAQQPAKMGEIAIQAAIDHYKGKKVEKETIS-PIYLVTKDNVEKY-NW |
| 4RWE Chain:A ((8-289)) | ------------------------------------------------IGVTVGDLANPFFVQITKGVELEARKLAGDKVKVTLVSSGYDLGQQVAQIDNFIAAKVDMIILNAADSKGIGPAVKRAKDAGIVVVAVDVAAEGAD--ATITSDNTQAGAMACKYISDRLKEKGNVVIINGPP-VSAIQNRVEGCESEFKKYPDIKVLSSNQNAKGSREGGLEVMTSLLAVNPKIDGVFAINDPTAIGADLAAKQAQRNEFFIVGVDGSPDAEEALKRGGNTLFVATPAQDPQVMASKAVEVGYGILQGNPAPKDPILIPVTLIDKNNISTYKGW |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4RWE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -96536 for 2403 contacts (-40.2/contact) +
2D Compatibility (PS) -29607 + (NN) -14760 + (LL) 2712
1D Compatibility (HY) -15600 + (ID) 4800
Total energy: -158591.0 ( -66.00 by residue)
QMean score : 0.575
|
|
|