Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNMMKYISELTTLIALAGLMVII--------------TLINPNFLTTNNLLNLLLQVTAN---GFIAFGMTFVILTGG-------IDLSVGSILALSSALTAGL-----IGHGVPVGIAIVLSVAL---GGILGMLNGLF--ISYGKLAPFIVTLATMTIFRGATLVYSNGNPITAGLSDSFLFQFLGQGYIVGIPFPVILMFLTFIILYILLHKTAFGKSVYALGGNEKA-AYISGIKLNKVKIIIYTISGIMASISGLIITSRLSSAQPTA-------------------GA-----------SYEMDAIAAVVLGGTSLSGGKGRIIGTLIGALI----------IGVLNNGLNIIGVSAFWQQVVKGIVILMAVLLDRFKVAK------------------------- |
| 3WFS Chain:C ((23-388)) | LNFYLSYFDDVAKVLPREHYCFIVGGWVRDRILGEPVGYNIDVDFLTTADPVELAKNFAKRIGGHFFVFEPTIASVVLHLPPYRYRFDFSPLKGKDLEKALIEDLKERDFTANAIAVNLDDVLTIVYDPTGGIKDLEQGLLRPVSIENLKRDPV-----RVLRGFRIAIEKNLQLT-----EDFYEFVKEDPRIVLKSAVERITHELFKIMKEKTAHKVIRELYEYGVLEAIIPEIGRLREVKDPLDEHTLKTLEYLEQVIEDRAKYLSAELLENFGKKRVLGEFTDVELLKWGALFHDIGKPQTTFYEHDKVGAQIVREIGERLRWGDEATEFVAKLVRHHLRPFFLREAFKKGELKRRGMANFWRECGDIAPHLFLLSIADAMASGDEEEDIKALMETIAELESFNRNEMK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131813 for 1718 contacts (-76.7/contact) +
2D Compatibility (PS) -27162 + (NN) 2682 + (LL) 676
1D Compatibility (HY) 13200 + (ID) 650
Total energy: -143067.0 ( -83.28 by residue)
QMean score : -0.050
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