Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------MADKNRT-----------FKLVGAGSSSTQEKIEKPALSFMQDAWRRLKKN--KLAVVSLYLLALLLTFSLASNLFVTQKDANGFDSKKVTTYRNLPPKLSSNLPFWNGS-----IKYAGNTESTDAYKSQNVPEKVKYALGTDSLGRSVAKRIIVGIRISLLVAIAATFIDLIIGVTYGLVSGFA--------GGRLDTLMQRIVEVISSIPNLVIVTMLGL------VLGNGITAIIISIAFTGWTSMSRQVRNLTLSYREREFVLAARSLGESPIKIAFKHILPNISGIIIVQIMMTIPSAIMYEAVLSAINLGVKPPTASLGSLISDAQENLQYYPYQVILPALALVMISLAFILLGDGLRDAFDPKSSDE------------------------------------------- |
| 1GC5 Chain:A ((1-467)) | MKESLKDRIRLWKRLYVNAFENALNAIPNVKGVLLAYNTNIDAIKYLDADDLEKRVTEKGKEKVFEIIENPPEKISSIEELLGGILRSIKLGKAMEWFVESEEVRRYLREWGWDELRIGGQAGIMANLLGGVYRIPTIVHVPQNPKLQAELFVDGPIYVPVFEGNKLKLVHPKDAIAEEEELIHYIYEFPRGFQVFDVQAPRENRFIANADDYNA----------RVYMRREFREGFEEITRNVELAIISGLQVLKEYYPDGTTYKDVLDRVESHLNILNRYNVKSHFEFAYTANRRVREALVELLPKFTSVGLN--EVELASIMEIIGDEELAKEVLEGHIFSVIDAMNVLMDETG---IERIHFHTYG---YYLALTQYRGEEVRDALLFASLAAAAKAMKGNLERIEQIRDALSVPTNERAIVLEEELEKEFTEFENGLIDMVDRQLAFVPTKIVASPKSTVGIGDTISSSAFVSEFGMRKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GC5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135215 for 2251 contacts (-60.1/contact) +
2D Compatibility (PS) -33764 + (NN) -2010 + (LL) 2076
1D Compatibility (HY) -4800 + (ID) 1650
Total energy: -175363.0 ( -77.90 by residue)
QMean score : 0.241
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