Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------------------------------MLLDMLSYDFMQRALLAVVAISIF--------APILGIFLILRRQSLMSDTLSHVSLAGVALGVVLGISP----------TWSTIFVVTLAAVVLEYLRTVYKHYMEISTAILMSMGLAISLIVMSKAHNVGNVSLEQYLFGSIITIGKEQVIALFVIALITFILTILFIRPMYILTFDEDTAFVDGLPVRTMSILFNVVTGIAIALTIPAAGALLVSTIMVLPASIAMRLGRNFKTVIFLGMLIGFVG---MVAGIFLSYYWETPASATITMIFIGIFL--LVSLVGLLRKR--- |
3LY7 Chain:A ((190-511)) | SRILLNPRDIDINMVNKSCNSWSSPYQLSYAIGVGDLVATSLNTFSTFMVHDKINYNIDEPSSSGKTLSIAFVNQRQYRAQQCFMSIKLVDNADGSTMLDKRYVITNGNQLAIQNDLLESLSKALNQPWPQRMQETLQKILPHRGALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSSPEFTYARAEKALVDIVRHSQHPLD------EKQLAALNTEIDNIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLEMSWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGANTLYWIENGIFQTSVPYVVPYLDKFLAS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -285746 for 2002 contacts (-142.7/contact) +
2D Compatibility (PS) -26833 + (NN) 2687 + (LL) 864
1D Compatibility (HY) 3600 + (ID) 1800
Total energy: -307228.0 ( -153.46 by residue)
QMean score : 0.193
|
|
|