Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLSKQLYKSLPLLTVVLCVGALQQNVEAKAKHYKTTSHVETQYVSTSSKKILPFTHNKQIKVGPLDNLGRATYSHIQLRDADEPKIKRERLTYNPTGWHNYKFTTEKGKTTWLMDRGHLVGYQFSGMN---N---VPENLVTMTKYLNTGFSENNPDGMLYYEN-RLDSWLANHKNFWLDYKVTPIYEGNNLVPSRVELQYVGIDKQGKLLEIKLGGGKEQTDEYGVTTVTLENTSPLAKIDYKTGMLIKEDGKQAEEGEDPNSDADENEAAIESASDIEENTNTNTSESDTNNVAPKNRIVYVANKGRSNTYWYSLENIKNANTANIVQMTEQEALNQHKHHSTTEAQ |
| 3NKQ Chain:A ((635-702)) | -----------------------------------------------------------------------------------------------------------------QMSYGFLFPPYLSSSPEAKYDAFLVTNMVPMYPAFKR--------VWTYFQRVLVKKYASE--RNGVNVISGPIFDYNYNGLRDIEDEIKQYVEGSSIPVPTHYYSIITSCLDFTQPADKCDGPLSVSSFILPHRPDNDESCNSSEDESKWVEELMKMHTARVRDIEHLTGLDFYRKTSRSYSEILTLKTYLHTYE----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NKQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12518 for 298 contacts (-42.0/contact) +
2D Compatibility (PS) -6497 + (NN) -652 + (LL) 9604
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -14213.0 ( -47.69 by residue)
QMean score : 0.082
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