Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKESFKLIATAAAGLEAIVGREIRNLGIDCQVENGRVRFHGDIKTIIETNLWLRAADRIKIIVGEFPARTFEELFQGVYGLDWENYLPLGAKFPIAKAKCVKSKLHNEPSVQAISKKAVAKKLQKVFHRPEGVPLQENGAEFKIEVSILKDKATVMIDTTGSSLFKRGYRAEKGGAPIKENMAAAIIQLSNWFPDKPLIDPTCGSGTFCIEAAMIGMNIAPGFNRD-FAFEAWPWVDQSQVQKVRDEAESKAN---YDIDLDISGFDLDGRMVEIARKNAEEAGLGDVIKLKQMRLQDLKTDKI----NGVIISNPPYGERLLDDKAVDILYNEMGQTFA-PLKTWSKFILTSDEGFEKKYGSQADKKRKLYNGTLKVDLYQYYGERVRRQVK |
| 3V97 Chain:B ((26-379)) | --------------------------AVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVH--------RNSQYGAMKVKDAIVDAFTR---PRPN---VDRDAPDIRVNVW------SIALDLSGDGLHLRGYRD---IAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQL-TNPLPKGPYGTVLSNPPY-----SEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESEDYTN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V97.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114812 for 2470 contacts (-46.5/contact) +
2D Compatibility (PS) -34042 + (NN) -8019 + (LL) 4540
1D Compatibility (HY) -18400 + (ID) 5150
Total energy: -175883.0 ( -71.21 by residue)
QMean score : 0.527
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