Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVFEKVQEIIVEELGKDAEEVTLNTTF-DDLDADSLDVFQVISEIEDAFDIQIETEEG--LNTVGDLVAYVEEKVK
1T8K Chain:A ((5-72))
----ERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA
General information:
TITO was launched using:
RESULT:
Template:
1T8K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42719 for 420 contacts (-101.7/contact) +
2D Compatibility (PS) -6621 + (NN) -366 + (LL) 676
1D Compatibility (HY) -5600 + (ID) 1450
Total energy: -56080.0 ( -133.52 by residue)
QMean score : 0.642
(partial model without unconserved sides chains):
PDB file :
Tito_1T8K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T8K-query.scw
PDB file :
Tito_Scwrl_1T8K.pdb
: