Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSYIEKIEANKVLDLKQIVPIEEEQMLSKTLVQRKDLGMTVFSLDKGQEIGRHSSPGDAMVNILSGLAQITIDQDKFDVAAGECIVMPANIPHSLYAKEAFQMLLVVVKPEV |
1YHF Chain:A ((1-110)) | MSYINNIEHAKVLDLTQEVMIEQDQMLSRTLVQRQDLGITVFSLDKGQEIGRHSSPGDAMVTILSGLAEITIDQETYRVAEGQTIVMPAGIPHALYAVEAFQMLLVVVKPEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17342 for 677 contacts (25.6/contact) +
2D Compatibility (PS) -9997 + (NN) 6029 + (LL) 0
1D Compatibility (HY) 6000 + (ID) 100
Total energy: 19274.0 ( 28.47 by residue)
QMean score : 0.015
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