Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------MIKNSTLTKLTRVAILSALCVVLRY-AFAPLPN-IQPITAIFLITV--------VLFDLKEG-VAT---VTITMLVSSFLMGF------------------------------------GPWVFLQIISFTLILCLWKFL-----IYPLTKAVCFGKITEVVLQTFFAGGLGVVYG----VIIDTCFAWLYHMP-------WWTYVLAGLSFNMA-HALSTCLFYPLLLPILRRFRNEKIH |
| 4L4W Chain:A ((1-267)) | GHMGPNAVELTTDQAWCLADVLGAGSYPWVLAITPPYSDHSQRSAFLAAQSAELTRMGVVNSAGAVDPRVAQWITTVCRATQWLDLRFVLLRGMVARRSEETVVALRNAQLVTFTAMDIGHQHALVPVLTAGLSGRKPARFDDFALPAAAGARADEQIRNGAPLAEVLEFLGVPPSARPLVESVFDGRRTYVEIVAGEHRDGHRVTTEVGVSIIDTPHGRILVHPTKAFDGEWISTFTPGSADAIAMA----------VERLTASLPSGSWF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131567 for 930 contacts (-141.5/contact) +
2D Compatibility (PS) -17834 + (NN) -4046 + (LL) 836
1D Compatibility (HY) 2400 + (ID) 1950
Total energy: -152161.0 ( -163.61 by residue)
QMean score : 0.078
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