Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTYEKIYQILSKNNNFISGETMANQLNISRTAIWKGIKTLEELGLEIESVTNKGYRLVSGDILLPEQLEQEIGIKVSLNNNSASTQLDAKMGIESKLKTPHLFLAPNQKKAKGRFDRPFFTSNQGGIYMSLLLQPNVPIEDIKPYTVMVASSAVKAISRLTGITPEIKWVNDIYLDNKKIAGILTEAIASVESGLVTNVIIGLGINFYIKEFPRALTKRAGSLFTEQPTITR-NQLITEIWNLFFNI---PLEDHLKVYREKSLVLDKTVSFMDGQTMYSGKAIDITDKGYLVVELDDGQLKTLRSGEISLSSW |
1WQW Chain:A ((29-232)) | -----------------------------------------------------------------------------------------------SYLEEGTVIVADKQTMGHGRLNRKW-ESPEGGLWLSIVLSPKVPQKDLPKIVFLGAVGVVETLKEFS-IDGRIKWPNDVLVNYKKIAGVLVEGKGD-------KIVLGIGLNVNNK-VPNGATSMKLELGSEVPLLSVFRSLITNLDRLYLNFLKNPM-DILNLVRD-NMILGVRVKIL-GDGSFEGIAEDIDDFGRLIIRLDSGEVKKVIYGDVSLRFL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105756 for 1526 contacts (-69.3/contact) +
2D Compatibility (PS) -20874 + (NN) -7831 + (LL) 7416
1D Compatibility (HY) -21200 + (ID) 3300
Total energy: -151545.0 ( -99.31 by residue)
QMean score : 0.545
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