Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKQFLKSAAILSLAVTAVSTSQPVAGITKDYNNRNEKVKKYLQENNFGHKIAYGWKNKVEFDFRYLLDTAKYLVNKEEFQDPLYNDAREELISFIFPYEKFLINNRDITKLTVNQYEAIVNRMSVALQKFSKNIFEKQKVNKDLIPIAFWIEKSYRTVGTNEIAASVGIQGGFYQNFHDYYNYSYLLNSLWHEGNVKEVVKDYENTIRQILSKKHEIEKILNQSTSDISIDDDDYEKGNKELLREKLNIILNLSKRDYRVTPYYEVNKLHTGLILLEDVPNLKIAKDKLFSLENSLKEYKGEKVNYEELRFNTEPLTSYLENKEKFLVPNIPYKNKLILREEDKYSFEDDEEEFGNELLSYNKLKNEVLPVNITTSTILKPFEQKKIVEDFNPYSNLDNLEIKKIRLNGSQKQKVEQEKTKSPTPQKETVKEQTEQKVSGNTQEVEKKSETVATSQQSSVAQTSVQQPAPVQSVVQESKASQEEINAAHDAISAYKSTVNIANT------AGVTTAEMTTL-INTQTSNLSDVEKALGNNKVNNGAVNVLREDTARLENMIWNRAYQAIEEFNVARNTYNNQIKTETVPVDNDIEAILAGSQAKISHLDNRIGARHMDQAFVASLLEVTEMSKSISSRIKE |
1TQQ Chain:A ((299-392)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NSQVKQAQYNFVGASEQLESAH---------RSVVQTVRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYNAKQELANARYNYLINQLNIKSALGTLNEQDLLALNNALSKPVSTNPE-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TQQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16508 for 414 contacts (39.9/contact) +
2D Compatibility (PS) -8938 + (NN) 591 + (LL) 35592
1D Compatibility (HY) -3200 + (ID) 1400
Total energy: 39153.0 ( 94.57 by residue)
QMean score : 0.477
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