Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MFGKLLK--------------YELKSVGKWYLTLNAAVL----------LVSIILGLVLKALGGNVSTDTNSTSAQIFTIILVLLLAMVISGSLLSTLA--IIIKRFYSNIFG---------RQGYLTLTLPVTTNQIICSKLLASLLWSIFNIFIV------IIGIILVILPLVGIGQFVVAFPEIYKIISSSNAPLFIAYFFLSYVAGTLLIYLSIAVGQLFTNKRVLMGIVSYFGISLLITFLTLIIDSIFHIDLFNSHANATFSQPVLLYNILV------SIVEIAIFYMLTHSIIKYKLNIQ--------- |
| 2JAK Chain:A ((30-372)) | IRDVPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFP |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JAK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -296308 for 1829 contacts (-162.0/contact) +
2D Compatibility (PS) -26000 + (NN) -2544 + (LL) 0
1D Compatibility (HY) -13200 + (ID) 1750
Total energy: -339802.0 ( -185.79 by residue)
QMean score : 0.358
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