Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTATKQHKKVILVGDGAVGSSYAFALVNQGIAQELGIIEIPALFDKAVGDAEDLSHALAFT-SPKKIYAATYADCADADLVVITAGAPQKPGETRLDLVGKNLAINKSIVTQVVESGFNGIFLVAANPVDVLTYSTWKFSGFPKERVIGSGTSLDSARFRQALADKIGVDARSVHAYIMGEHGDSEFAVWSHANVAGVQLEQWLQENRDIDEQGLVDLFISVRDAAYSIINKKGATYYGIAVALARITKAILDDENAVLPLSVYQEGQYGDVKDVFIGQPAIVGAHGIVRPVNIPLNDAELQKMQASAEQLKDIIDEAWKNPEFQEASKN
2LDB Chain:A ((8-315))--------RVVVIGAGFVGASYVFALMNQGIADE--IVLIDANESKAIGDAMDFNHGKVFAPKPVDIW--DYDDCRDADLVVICAGA--------LDLVDKNIAIFRSIVESVMASGFQGLFLVATNPVDILTYATWKFSGLPHERVIGSGTILDTARFRFLLGEYFSVAPQNVHAYIIGEHGDTELPVWSQAYIGVMPIRKLVESK------DLERIFVNVRDAAYQIIEKKGATYYGIAMGLARVTRAILHNENAILTVSAYLDGLYGE-RDVYIGVPAVINRNGIREVIEIELNDDEKNRFHHSAATLKSVLARAFTR---------


General information:
TITO was launched using:
RESULT:

Template: 2LDB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -205286 for 2561 contacts (-80.2/contact) +
2D Compatibility (PS) -30659 + (NN) -6525 + (LL) 2016
1D Compatibility (HY) -36800 + (ID) 8050
Total energy: -285304.0 ( -111.40 by residue)
QMean score : 0.488

(partial model without unconserved sides chains):
PDB file : Tito_2LDB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2LDB-query.scw
PDB file : Tito_Scwrl_2LDB.pdb: