Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSMDWETFLDPYIQTVGELKIKLRGIRKQFRKQNRHSPIEFVTGRVKSVESIQEKMVLRGISEENLAQDLQDIAGLRIMVQFVDDVDEVLALLRKRHDMTVVQERDYITHMKSSGYRSYHVVVEYPVDTIDGQKKVLAEIQIRTLAMNFWATIEHSLNYKYQGDFPEEIKQRLEKTAKIALELDEEMRKIREDIREAQLLFDPLNRKLSDGVGNSDDTDEFYR |
| 2PZZ Chain:A ((5-29)) | --------------------------------------------------------------------------IIKAKVKPTEDKYKVKKAILNIFPKAKLTFIEKDNEFGEWEGKTKSVEKLKELLRSQSILDAARMVLEKGMTENATKFYLNKQAAYVGAVNFDIDTHGGIFVKILADENEDIMKIIKDIAPRTKGGVIIN------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PZZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4689 for 96 contacts (-48.8/contact) +
2D Compatibility (PS) -2884 + (NN) -3867 + (LL) 7344
1D Compatibility (HY) 1600 + (ID) 150
Total energy: -2646.0 ( -27.56 by residue)
QMean score : 0.483
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