Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVKQVFPKGFLWGGATAANQCEGAYNVDGRGLANVDVVPTGEDRFAIISGQKKMFDFEEGYFYPAKESIDFYHHYKEDLALLAEMGFKTYRMSIAWTRIFPKGDELYPNEAGLRFYENIFKECRKYGIEPLVTITHFDCPIYLIKHYGGWRSRKMIGFYERLVRALFTRFKGLVKYWLTFNEINMILHAPF-MGAGLYFEDGENQEQIKYQAAHHELVASAIAVKIAHEVDP-NNQIGCMLAAGQYYPNTCHPQDYWASMQKNR-ENYFFIDVQTRGKYPNYAKKYFEHLGISIQMTAEDLALLRDYTVDFISFSYYSS-RV-ASGNPTVSEQVQENIFASLKNPYLKSSEWGWQIDPLGLRITLNAIWDRYQK-PMFIVENGLGAVDIPDENGYVEDDYRIDYLRQHIAAMRDAIYVDGVNLIGYTTWGCIDLVSAGTGEMEKRYGFIYVDRNNKGEGTLKRYKKKSFYWYKKVIASNGSQIE |
4HZ7 Chain:A ((5-441)) | -----FPEGFLWGAATSSYQIEGAWNEDGKGESIWD-------RFTRIPGKIKNGD-------SGDVACDHYHRYEQDLDLMRQLGLKTYRFSIAWARIQPDSSRQI-NQRGLDFYRRLVEGLHKRDILPMATLYHWDLPQW-VEDEGGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAGYHMG---LFAPGLKDPTLGGRVAHHLLLSHGQALQAFRALSPAGSQMGITLNFNTIYPVSAEPADVEAARRMHSFQNELFLEPLIRGQYNQATLMAYPNLPEFI--APEDMQTI-SAPIDFLGVNYYNPMRVKSSPQPPGIEVVQ------VESPV---TAMGWEIAPEGLYDLLMGITRTYGKLPIYITENGAAFDDQPDQSGQVNDPQRVGYFQGHIGAARRAL-ADGVDLRGYYAWSLLDNFEWAEG-YSKRFGIIYVDFE-----TQQRTLKQSAQWYRDVIANNGLE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HZ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -249399 for 3742 contacts (-66.6/contact) +
2D Compatibility (PS) -45724 + (NN) -14293 + (LL) 2744
1D Compatibility (HY) -25200 + (ID) 8050
Total energy: -339922.0 ( -90.84 by residue)
QMean score : 0.522
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