Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIKKMLFGSYDYHKISEDGKEKLSIKIDSGWVIGLSILGLIGWLVLK
1O9A Chain:B ((13-36))
------------STTEVEDSKPKLSIHFDNEWPKED------------
General information:
TITO was launched using:
RESULT:
Template:
1O9A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 42 for 51 contacts (0.8/contact) +
2D Compatibility (PS) -2468 + (NN) 453 + (LL) 1944
1D Compatibility (HY) 400 + (ID) 450
Total energy: -79.0 ( -1.55 by residue)
QMean score : 0.230
(partial model without unconserved sides chains):
PDB file :
Tito_1O9A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O9A-query.scw
PDB file :
Tito_Scwrl_1O9A.pdb
: