Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNREEVQLLGFEIVAYAGDARSKLLEALRAAEAGDFSKADALVEEASGCIAEAHKSQTTMLAKEAAGEEIPYSVTMMHGQDHLMTTILLKDVMHHLIELYKRGIK
3K1S Chain:A ((4-107))
-MMTTAEQIPFQLILNSGNARSFAMEALQFAKQGKMAEADEAMVKAKEAINEAHHFQTELIQSEARGEKTEISVLLIHAQDHLMNAITVKELAAEFIDLYKKLEA
General information:
TITO was launched using:
RESULT:
Template:
3K1S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20204 for 723 contacts (-27.9/contact) +
2D Compatibility (PS) -11770 + (NN) -11052 + (LL) 208
1D Compatibility (HY) -5600 + (ID) 1850
Total energy: -50268.0 ( -69.53 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_3K1S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K1S-query.scw
PDB file :
Tito_Scwrl_3K1S.pdb
: