Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKDYINRILHFIKEHMTYHVNFIDDFLDIKWEKVSNIHLRFWTTIIAYLVIFILSISTVILNLVLLFQGFLTQNPIIYLLFFITLVCAFYFAYKFITYTPTIVKNALQYIKKLKNV
2YPA Chain:A ((64-79))---------------------------------------------------------------------------------------------------NEILRLAMKYINFLAK-


General information:
TITO was launched using:
RESULT:

Template: 2YPA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2307 for 57 contacts (40.5/contact) +
2D Compatibility (PS) -1742 + (NN) -1470 + (LL) 10800
1D Compatibility (HY) -2400 + (ID) 250
Total energy: 7245.0 ( 127.11 by residue)
QMean score : 0.595

(partial model without unconserved sides chains):
PDB file : Tito_2YPA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YPA-query.scw
PDB file : Tito_Scwrl_2YPA.pdb: