Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDAAANDAVILFVGTKKQAAEAVAEEAKRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRMEEEGTFELLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGIPVVAMVDTNADPDDIDVIIPANDDAIRAVKLITSKLADAVIEGRQG---EDADVDFAQEAQADSIEEIVEVVEGSNND
2HHH Chain:B ((7-240))
-----VKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAMRGGTILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFASPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLIIQARGGVVEPSPSYALVQ--------------------
General information:
TITO was launched using:
RESULT:
Template:
2HHH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83852 for 1920 contacts (-43.7/contact) +
2D Compatibility (PS) -24975 + (NN) -15073 + (LL) 2092
1D Compatibility (HY) -22000 + (ID) 5900
Total energy: -149708.0 ( -77.97 by residue)
QMean score : 0.616
(partial model without unconserved sides chains):
PDB file :
Tito_2HHH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HHH-query.scw
PDB file :
Tito_Scwrl_2HHH.pdb
: