Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKELITKQKTWEIILLVVSGILIPVILAIIKMKVNSIKYISITDHNILNIDSKGKLQYINKTKIFSNLINHQLTVENKGNMKQAITEIIISQIKKVETHIPDIQLDGGFYEKFQKYLLIGYNNGNIESKVETIRLQVCSVEQNTFCENL-IDEIFSDDKIIDSGSVESIFLIDLKKYYSIFDNNKKLSDLKIIALDENGNEIQGFFILVRYDRDEKMFKPHPRGLAGPGVEKLPLIDITKDVTKATAKTHQILEQGANQVGFNILVDRTCILKYKVKIKSGHKVIIDNSNYEVKIRIPEYNQEVGMLEGDFYYFIYDNVVELENHFVYSKQNIKTISPKLVFDKYRTVKEIYK |
| 2KJG Chain:A ((16-71)) | --------------------------------------------------------------------------------------------------------------------------------------------KGKVNFNLVMQILDEIELD-LRGSDNIKTSIIYVYSSHLDEIRKNKEFYDMIAEILQRYYKKIGIENVNQLILTTIKLEHHHHHH--------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KJG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4491 for 335 contacts (-13.4/contact) +
2D Compatibility (PS) -5807 + (NN) -1746 + (LL) 20488
1D Compatibility (HY) -2400 + (ID) 400
Total energy: 5644.0 ( 16.85 by residue)
QMean score : 0.165
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