Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVMATREPGGIDIAEQIREVILNENNILMDPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSSLAYQGYARGLGIDEVLSINEFAIGDMMPHVTVYFSIDPEEGLKRIYANGSREKNRLDLEKLDFHTKVQEGYQELMKRFPERFHSVDAGQSKDLVVQDVLKVIDEALKKIQL
4EDH Chain:A ((5-190))
-TGLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPMAADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALESFVQGDLRPDLTLVFDLPVEIGLARAAARG--RLDRFEQEDRRFFEAVRQTYLQRAAQAPERYQVLDAG-----------------------
General information:
TITO was launched using:
RESULT:
Template:
4EDH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63063 for 1459 contacts (-43.2/contact) +
2D Compatibility (PS) -20576 + (NN) -10140 + (LL) 2768
1D Compatibility (HY) -8800 + (ID) 4000
Total energy: -103811.0 ( -71.15 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_4EDH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EDH-query.scw
PDB file :
Tito_Scwrl_4EDH.pdb
: