Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLIVAVVQDQDSNRLLKTLTDHNFRVTKLATTGGFLKSGNTTFMIGVEDIRVNKALSLIKENGQKRDQMIAPVSPMGGNADSYVPYPVEVEVGGATVFVLPVDEFHQF
4D3H Chain:B ((20-128))
MKMIIAIVQDQDSQELADQLVKNNFRATKLATTGGFLRAGNTTFLCGVNDDRVDEILSVINQTCGNREQLVSPI-------------PVEVEVGGATVFVMPVDAFHQF
General information:
TITO was launched using:
RESULT:
Template:
4D3H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44945 for 605 contacts (-74.3/contact) +
2D Compatibility (PS) -10684 + (NN) -5464 + (LL) -108
1D Compatibility (HY) -12000 + (ID) 3050
Total energy: -76251.0 ( -126.03 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_4D3H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4D3H-query.scw
PDB file :
Tito_Scwrl_4D3H.pdb
: