Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIPEKKSIAIMKELSIGNTKQMLMINGVDVKNPLLLFLHGGPGTPQIGYVRHYQKELEQYFTVVHWDQRGSGLSYSKRISHHSMTINHFIKDTIQVTQWLLAHFSKSKLYLAGHSWGSILALHVLQQRPDLFYTYYGISQVVNPQDEESTAYQHIREISESKKASILSF----LTRFIGAPPWKQDIQHLIYRFCVEL--TRGGFTHRHRQSLAVLF-------------QMLTGNEYGV-RNMHSFLNGLRFSKKHLTDELYRFNAFTSVPSIKVPCVFISGKHDLIVPAEISKQYYQELEAPEKRWFQFENSAHTPHIEEPSLFANTLSRHARHHL |
1MTZ Chain:A ((31-293)) | ----------------------------------LMTMHGGPGMSH-DYLLSLRDMTKEGITVLFYDQFGCGRS--EEPDQSKFTIDYGVEEAEALRSKL---FGNEKVFLMGSSYGGALAL----------------AYAVKYQD-------HLKGLIVSGGLSSVPLTVKEMNRLIDELPAK-------YRDAIKKYGSSGSYENPEYQEAVNYFYHQHLLRSEDWPPEVLKSLEYAERRNVYRIMNGP--NEFTITGTIKDWDITDKISAIKIPTLITVGEYDEVTP-NVARVIHEKIAGSELHVFR--DCSHLTMWEDREGYNKLLSDFILKHL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1MTZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -82204 for 2082 contacts (-39.5/contact) +
2D Compatibility (PS) -25167 + (NN) -5918 + (LL) 6440
1D Compatibility (HY) -12800 + (ID) 3150
Total energy: -122799.0 ( -58.98 by residue)
QMean score : 0.315
|
|
|