Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMIQQETRLKVADNSGAREVLTIKVLGGSGRKTANIGDVIVCTVKQATPGGVVKKGEVVKAVIVRTKSGARRSDGSYISFDENACVIIRDD-KSPRGTRIFGPVARELRENNFMKIVSLAPEVI
5GAG Chain:L ((1-123))MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLAPEVL


General information:
TITO was launched using:
RESULT:

Template: 5GAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -82146 for 927 contacts (-88.6/contact) +
2D Compatibility (PS) -13457 + (NN) -6683 + (LL) 0
1D Compatibility (HY) -14400 + (ID) 3950
Total energy: -120636.0 ( -130.14 by residue)
QMean score : 0.567

(partial model without unconserved sides chains):
PDB file : Tito_5GAG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GAG-query.scw
PDB file : Tito_Scwrl_5GAG.pdb: