Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVMTDPIADMLTRIRNANMVRHEKLEIPASKLKREIAEILKREGFIRDVEFVEDSKQGIIRVFLKYGQNN-------ERVITGLKRISKPGLRVYAKSNEVPRVLNGLGIAIISTSQGVLTDKEARAKQAGGEVLAYVW
1N34 Chain:H ((1-138))
-MLTDPIADMLTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDVDGKPYLRVYLKYGPRRQGPDPRPEQVIHHIRRISKPGRRVYVGVKEIPRVRRGLGIAILSTSKGVLTDREARKLGVGGELICEVW
General information:
TITO was launched using:
RESULT:
Template:
1N34.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82954 for 972 contacts (-85.3/contact) +
2D Compatibility (PS) -13803 + (NN) -422 + (LL) 208
1D Compatibility (HY) -13600 + (ID) 3750
Total energy: -114321.0 ( -117.61 by residue)
QMean score : 0.443
(partial model without unconserved sides chains):
PDB file :
Tito_1N34.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N34-query.scw
PDB file :
Tito_Scwrl_1N34.pdb
: