Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIREDEVRKLVGEMREPFLQRPLGELDAVKEIKIKPEKRHISVKVALAKTGTAEQMQIQQEIVNVLKGAGAETVGLRFEELPEETVAKFRAPSAEKKTLLNMDNPPVFLAVASGKGGVGKSTVSVNLAISLARLGKKVGLIDADIYGFSVPDMMGITVR------PTIEGEKLLPVERFGVKVMSMGFFVEENAPVVWRGPMLGKMLNNFFHEVEWGEVDYIVLDLPPGTGDVALDVHTMLPSCKEIIVSTPHPTAAFVAARAGSMAIKTDHEVVGVIENMAYYESAKTGE---REYVF------GK-GGGDKLAEE-----LNVPLLGRIPLKQPDWD-KDQFAPSVYDENHPIGEIYQDIAKKIDAKMSVQV |
| 3R9I Chain:A ((4-246)) | -----------------------------------------------------------------------------------------------------------IIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGLRNLDLIMGCERRVVYDFVNVIQGDATLNQALIKDK-RTENLYILPASQTRDKDALTREGVAKVLDDLKAMDFEFIVCDSPAGIETGAL--MALYFADEAIITTNPEVS-----------SVRDSDRILGILASKS--RRAENGEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVLRASNQGEPVILDINADAGKAYADTVERL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R9I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123484 for 1784 contacts (-69.2/contact) +
2D Compatibility (PS) -22714 + (NN) -2215 + (LL) 11220
1D Compatibility (HY) -8800 + (ID) 3000
Total energy: -148993.0 ( -83.52 by residue)
QMean score : 0.397
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