Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKTIFAFLTGLMMFGTITAASASPDSKNQTAKKPKVQTGIDTLLPDYKKQLKGKRIGLITNPAGVNTSLKSSVDILYENPDIKLTALFGPEHGVRGDAQAGDEVGSYIDEKTGVPVYSLYGKTKKPTPEMLKNVDILMFDIQDVGTRFYTYIYTMAYAMEAAKENGIPFMVLDRPNPQGGNHIEGPILEPEYASFVGLYPIPLKHGMTIGELASLFNKEFSIDADLTVVKMKHWKRKMDFDDTRLPFVLPSPNMPTVESTFVYPATGLIEGTNISEGRGTTKPFELIGAPFIKSTELEETLNSLHLPGVTFRAASFTPTFSKHQGTLCHGVQLYVTDRDKFEAVKTGLSVIKTIHDLYPEDFEFLSTGSFDKLAGNGWIRTKIENGTSVENIINSYEKTLQQFSKTRKKYLIY |
2D59 Chain:A ((19-109)) | --------------------------------------------------LTRYKKIALVGASPKPERDANIVMKYLL-EHGYDV-YPVNPKYE----------------EVLGRKCY---PS----VLDIPDKIEVVDLFVKPKL---------TMEYVEQAIKKGAKVVWFQY----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D59.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35397 for 687 contacts (-51.5/contact) +
2D Compatibility (PS) -10448 + (NN) -9190 + (LL) 18084
1D Compatibility (HY) -4800 + (ID) 550
Total energy: -42301.0 ( -61.57 by residue)
QMean score : 0.417
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