Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKENNYHHLAQKILELCGGKSNISSYTHCMTRLRITPYDESKADAQALRKLDGVLGVVEAETLQIILGTGVVNHVTAAFSKLVSAEEGADVKEAAAKKKADINRKNATPFKLFLRKIASIFIPLIPALVASGLITGITKAIIQA--GWLS--ADSQIAIILTVIGSGLFTYLGIL----VGINASKEFGGTPALGALAGIL---IINPEIAK-I-----------SLFGEELLPGRGGLIGVLFAAIFIAYTEQFIRR-----FIPQSLDI-------IVTPTVSLL-ITGIVTYVVFMPLGGFISDAITSGL-LSILD-IGGIAAGFILGATFLPLVVTGLHQGLT--PVH----MEL----IN--SIGND---PLL-PILA-MGGAGQVGAAF----AVFVKTKKTTLRKAIAGGLPSGLLGIGEPLIFGVTLPL----GRPFLTACLGAGIGGAFQAYFQVATIA---IGVS---GLPLSFLVLPSQIILYIVGLFISYAAGFLLTYAFGYKDEMASQFD |
3QNQ Chain:A ((13-421)) | ---------------------------------------------------------------------------------------------------------AGKVAEQRHLLAIRDGLVLTMPFLIIGSIFLIISTLPIPGYSEFMASLFGKNWNVALGYPVSATFNIMALIAVFGIAYRLGEYYKVDALASGALSLVTFLLATPFQVAYIMPGTKESILVDGVIPAA-LMGSQGLFVAMIIAIISTEIYRFLVQKKMIIKMPETVPPAVTRSFAALIPGFIVVTVVWIIRLIFEHTTFGSIHNVVGKLLQEPLSILGASLWGAVIAVILVHVLWACGIHGATIVGGVMSPIWLSLMDQNRIAFQAGQDVPNTITAQFFDLWIYMGGSGATLALVVGMLLFARSQQLKSLGRLSIAPGIFNINEMVTFGMPIVMNPLLLIPFIVVPVVLTIVSYFAMEWGLVARPSGAAVTWTTPILFSGYLGSGG-KISGVILQLVNFALAFVIYLPFLKI-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QNQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -250734 for 2538 contacts (-98.8/contact) +
2D Compatibility (PS) -35094 + (NN) -6013 + (LL) 8552
1D Compatibility (HY) -22400 + (ID) 2550
Total energy: -308239.0 ( -121.45 by residue)
QMean score : 0.201
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