Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQDISLSFYKPEHLPELQSFTLTNDDKRFTSLPKEVLSQALGIQDRYPVVILKDDLPVGFFILHASKETLASY---SNNPFALLLSSLSLTAVHHGKGYAKKAMLLLPAFVSGYFPWCDEIILAVNHLNIRAKHLYMKSGFLDKGRRRI--GPLGEQLILHHFL
4R3L Chain:A ((11-167))
---DFTLRNARMDDIDQIIKINRLTLPENY---PYYFFVEHLKEYGLAFFVAIVDNSVVGYIMPRIE-WGFSNIKQLPSLVRKGHVVSIAVLEEYRRKGIATTLLEASMKSMKND-YNAEEIYLEVRVSNYPAIALYEKLNFKKVKVLKGYYADGEDAYLMARPL
General information:
TITO was launched using:
RESULT:
Template:
4R3L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110772 for 1147 contacts (-96.6/contact) +
2D Compatibility (PS) -16443 + (NN) -4639 + (LL) 776
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: -136628.0 ( -119.12 by residue)
QMean score : 0.401
(partial model without unconserved sides chains):
PDB file :
Tito_4R3L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4R3L-query.scw
PDB file :
Tito_Scwrl_4R3L.pdb
: