Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MILVSSCLGGIECRYNGSHAASEKIRKLVDEKKAVM-ACPELLGGFSTPREPAEIIGGTGEDVLNGTAKIVTASGEDVTELYMEGAAKTLAYAKEINASAVILKENSPSC--GSGFIYNGTFSGKKIT--GSGVTAALL----KQAGYRVISENELNDIL |
4QQD Chain:A ((133-281)) | --------------------GLYKVNEYVDARDTNMGAWFEAQVVRVTRKEEDVIYHVKYDD--YPENGVVQMNSRDVRA-----RARTIIKWQDLEVGQVVMLNYNPDNPKERGFWYDAEISRKRETRTARELYANVVLGDDSLNDCRIIFVDEVFKIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QQD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14119 for 835 contacts (16.9/contact) +
2D Compatibility (PS) -12599 + (NN) 756 + (LL) 1852
1D Compatibility (HY) -7600 + (ID) 1400
Total energy: -4872.0 ( -5.83 by residue)
QMean score : 0.007
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