Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKKWLIQFAVMLSVLSTFTYSASAVGVTAITGNNSFDTAMPIGYWKYKNIDTTILEAGQDEAYFTFTANKGEKVYMRSTYQSAYTGMKIEIYDKNRIPVSQGTEVINPNTFSSFIYANADAQNTTDTFYVKVSRGTYTG--NMYFTLSIEDRIKSGSGTFQFSGVAENKGNTSLSPSGSDSSVIKVDLTNQSGIPRDAIVTRVQTTATQTPSQGNTRHLI---------MTSEN-NEWSRALVN---SSTSGSYDISLSDQLSVAKVWSFKYNTLATARSTMSNVKAKIDYEYDVTKQF |
| 1IWG Chain:A ((29-211)) | ------------------------------------------------------------------------------------------------KLPVAQYPTIAPPAVTISASYPGADAKTVQDTV-TQVIEQNMNGIDNLMYMSSNSD----STGTVQITLTFE---------SGTDADIAQVQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAANMKDAISRTSGVGDVQLFGSQYAMRIW------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1IWG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 9851 for 923 contacts (10.7/contact) +
2D Compatibility (PS) -14809 + (NN) -818 + (LL) 9748
1D Compatibility (HY) -5200 + (ID) 1900
Total energy: -3128.0 ( -3.39 by residue)
QMean score : 0.130
|
|
|