Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKNDQIVFEKTKNIAHDINQMQN---------QQEIIDYL----FRQDSLTLNQLKHYYSEPSLPLQFLVKV------AVLCMFISMTLAS---FLFIQAKEVFTNTILSDISPAVFSIF-TVICIFMTYTKIIKKGNKNKG----KASLNQRSEFYEKNKLINTILYKKYKMDQQNIQANKHTASDNEDSM-----NFSAVLNHVLTISKNDKELL----GYLDTRDNAMLSQLKAYFSTRPFSLPHYMSLMFCGSIIVVYATSLFSGQINYIDIPHIFIFLLLI---IFLKILIDLIKLLNISRKGQLHTVLH-----FAQRAEYLRMRGV----IDFILTERYNKKIM---------------------------------------------------------------------- 4WW4 Chain:A ((3-458)) -QISEVRGNTRDHRTAAHTHIKGLGLNSSGIAEKQAAGFVGQCAAREACGVVVDLIKAHKMAGR--GVLLAGGPGTGKTALALAISQELGTKIPFCPITGSEIYSTEV--KKTEVLMENFRRAIGLRVRETKDVYEGEVSTLLIGLKSARGQKLDQKERVQVGDVIYIETNTGACRSDAYATEFDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDVANARPDIISMMGQLMKPKMTEITDKLRMEINKVVQKYINQGVAELIPGVLFIDEAHMLDIECFTYLNKALESPIAPIVVLASNRGIATIRGADDLKAAHGIPPDFLQRLLIIPTHPYEPDEIRRIVRIRAQTEGVQLTDAAVDRVAEHGVRISLRYCLQLLAPASILARVNGRTQVDVQDIAEAEELFLDARRSANILTSTGGLH

General information: TITO was launched using: RESULT: Template: 4WW4.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1205 -158024 -131.14 -530.28 target 2D structure prediction score : 0.36 Monomeric hydrophicity matching model chain A : 0.63 3D Compatibility (PKB) : -131.14 2D Compatibility (Sec. Struct. Predict.) : 0.36 1D Compatibility (Hydrophobicity) : 0.63 QMean score : 0.132

(partial model without unconserved sides chains): PDB file : Tito_4WW4.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4WW4-query.scw PDB file : Tito_Scwrl_4WW4.pdb: