Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMATIDLQKKSVKIVLEKKQLTKVTARVGLVLDITGSMRPLYKNGTVQNVVERILAVADQFDDNGLLDVWVYDNEFSRLKPVSEKDFSGYVDREILNNDRLHKFGRNDEPPVMKDVLRKYVTEE--PSSYPAFIVFINDGGCKK----SIKPIIEASSDKPVFWQFVGIGNGNFDFLNKLDTLEGRVIDNTNFLHIEEIDRISDDELYDALLAEFPFWLKEAKEKGIVREQEPPAEKPKKKGFFSRLFSK
3N2N Chain:F ((5-159))---------------------YGGFDLYFILDKSGSVLHH--WNEIYYFVEQLAHKF--ISPQLRMSFIVFSTRGTTLMKLTE-DRE-QIRQGLEELQKVLPGGDTYMHEGFERASEQIYYENRQGYRTASVIIALTDGELHEDLFFYSEREANRSRDLGAIVYAVGVKDFNETQLARIADS-------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3N2N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 761 -83299 -109.46 -559.05
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain F : 0.64

3D Compatibility (PKB) : -109.46
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.414

(partial model without unconserved sides chains):
PDB file : Tito_3N2N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N2N-query.scw
PDB file : Tito_Scwrl_3N2N.pdb: