Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKISFSESQKLFAYFSGLIAALSLFIYYVSAQQSEGALILCITFGVIAAGIWFGPIYALAVTLIVLFVLGTLMMFFQTGQTSLFPAEEGLRMLVVWGIALLLFSFISGRIHDITAELRRSMTRLQSEIKSYVAVDRVTGFDNKQRMKLELSEEIKRAERYGNSFVFLLLHMHYFKEFKSLYGEKETDRLFQYVGQQIRTSVRETDKKFRPSDERIGIVLT--HTPAEHMPAVLTKLKKQLDTYQLENGKYV--SLTFHVCYLPYRNDIQTADQFLEELENEMMMNEL
4IOB Chain:A ((1-135))----------------------------------------------------------------------------------------------------------------------------------------LTSLPNRAFFEGRLSRALRDANEHREQLAVLFIDSDRFKEINDRLGHAAGDTVLVNIAMRIRGQLRESDLVARLGGDEFAVLLAPLASGADALRIADNIIASMQAPIRLSDGSTVSTSLTIGIALYPEHADTPAA----------------


General information:
TITO was launched using:
RESULT:

Template: 4IOB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 519 -72629 -139.94 -554.42
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -139.94
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.543

(partial model without unconserved sides chains):
PDB file : Tito_4IOB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IOB-query.scw
PDB file : Tito_Scwrl_4IOB.pdb: