Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSFWKNKNVFVTGCTGLLGSYLVKELIEQGANVTGLVRDHVPQSNLYQGEHIKKMNIVRGSLEDLAVIERALGEYEI------DTVFHLAAQAIVGVANRNPISTFEANILGTWNILEACRKHPLIKRVIVASSDKAYGDQENLPYDENMPLQGKHPYDVSKSCADLISHTYFHTYGLPVCITRCGNLYGGGDLNFNRIIPQTIQLVLNGEAPEIRSDGTFVRDYFYIEDAVQAYLLLAEKMEENNLAGEAFNFSNEIQLTVLELVEKILKKMNSNLKPKVLNQGSN-EIKHQYLSAEKARKLLNWTPAYTIDEGLEKTIEWYTEFFKK 3KO8 Chain:A ((2-304)) -------RIVVTGGAGFIGSHLVDKLVELGYEV-------VVVDNLSSG----RREFVNPSAE-LHV--RDLKDYSWGAGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVV-GPRLRHGVIYDFIMKLRRNPNVLEVL----QRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVL--GLRPEIRLV---GDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAE--------

General information: TITO was launched using: RESULT: Template: 3KO8.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1686 -187211 -111.04 -663.87 target 2D structure prediction score : 0.58 Monomeric hydrophicity matching model chain A : 0.75 3D Compatibility (PKB) : -111.04 2D Compatibility (Sec. Struct. Predict.) : 0.58 1D Compatibility (Hydrophobicity) : 0.75 QMean score : 0.443

(partial model without unconserved sides chains): PDB file : Tito_3KO8.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3KO8-query.scw PDB file : Tito_Scwrl_3KO8.pdb: