Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKTKLTGRIVTRDDPDYNEARTNINLSLERYPDIIVFCQNKQDALNALKWARENRVPFRIRGGRHSYENFSLLNN-GLVIDLSEMKKITVNQDKKLAYIEAGAELGEVYRTLWQ-YGLTLPAGTIANVGLTGLTLGGGIGLLTRAAGLTCDSLVQLEMIVADEKEGADLITV----SCSNHPDLFWASQGGGGGNFGIVTSMTFKAV--------------PISQVSIFSITWGWDDFEEV--------YNTW--QNW---APYTDDRLTSSIEFWPKEVNRIEALGQFVGPKTELKKLLKPLLKAGSPTSGM-----VKTTPFIEAVTFFNSPG-GNQPQKMKRSGSFIEKPLSERAISTIKHFLEHAPNQNAS--VWQQALGGAAGRVAPDQTAFYYRDAIIAQEYLTNWTSPGEKRQNVRWIEGLRTSLSKETM----------GDYVNWPDIEIRN---------WPRTYYGENVERLRRVKTTYDPENVFRFEQS--IPPLRRSLFF
2Y3S Chain:A ((44-529))-----------------YEDLRRGENLRFVGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFVANSDVRVVMDMSRLSAVGFDEERGAFAVEAGATLGAVYKTLFRVWGVTLPGGACPDVGAGGHILGGGYGPLSRMHGSIVDYLHAVEVVVVDASGDARTVIATREPSDPNH-DLWWAHTGGGGGNFGVVVRYWLRTAEADVPPEPGRLLPRPPAEVLLNTTVWPWEGLDEAAFARLVRNHGRWFEQNSGPDSPWCD--LYSVLALTRSQSGALAMTTQLDATGPDAEKRLETYLAAVSEGVGVQPHSDTRRLPWLHSTRWPGIAGDGDMTGRAKIKAAYARRSFDDRQIGTLYTRLTSTDYDNPAGVVALIAYGGKVNAVPADRTAVAQRDSILKIVYVTTWEDPAQDPVHVRWIRELYRDVYADTGGVPVPGGAADGAYVNYPDVDLADEEWNTSGVPWSELYYKDAYPRLQAVKARWDPRNVFRHALSVRVPP-------


General information:
TITO was launched using:
RESULT:

Template: 2Y3S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2454 -186865 -76.15 -440.72
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -76.15
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.411

(partial model without unconserved sides chains):
PDB file : Tito_2Y3S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Y3S-query.scw
PDB file : Tito_Scwrl_2Y3S.pdb: