Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNDFSLELPVRTNKPRETGQSILIDNGYPLQFFKDAIAGASDYIDFVKFGWGTSLLTKDLEEKISTLKEHDITFFFGGTLFEKYVSQKKVNEFHRYCTYFGCEYIEISNGT---LPMTNKEKAAYIADFSD-E---FLVLSEVGSKDAELASRQSSEEWLEYIVEDMEAGAEKVITE-------------------ARESG-TGGICSSSG----DVRFQIVDDIISSDIDINRLIFEAPNKTLQQGFIQKIGPNVNLANIPFHDAIALETLRLGLRSDTFFL
2EHH Chain:A ((18-201))------------------------------------------------------------------------------------VDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTG--------GNATHEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLASECENIVASKESTPNMDRISEIVKRLGESFSV--LSGDDSLTLPMMALGAKG-----


General information:
TITO was launched using:
RESULT:

Template: 2EHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 675 -74997 -111.11 -490.17
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -111.11
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.516

(partial model without unconserved sides chains):
PDB file : Tito_2EHH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2EHH-query.scw
PDB file : Tito_Scwrl_2EHH.pdb: