Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIPLHENLAGKTAVITGGSGVLCSAMARELARHGMKVA---ILNRTAEKGQAVVKEITAAGGTACAVAADVLDRMSLERAKEDILGQFGAVDLLINGAGGNHPDAITDVETYEEAGEGQSFFDMDERGFLTVFSTNFTGAFLASQVFGKELLKADSPAIINLSSMSAYSPMTKVPAYSAAKASINNFTMWMAVHFAETGLRVNAIAPGFFLTKQNHDLL-INQDGTFTSRSHKIIAGTPMKRFGKPEDLLGTLLWLADESYSGFVTGITVPVDGGFMAYSGV
3CXR Chain:A ((11-266))------SLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYK---AAGINAHGYVCDVTDEDGIQAMVAQIESEVGIIDILVNNAG-----IIRRVPMIE----------MTAAQFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLREL------HPFDQFIIAKTPAARWGEAEDLMGPAVFLASDA-SNFVNGHILYVDGGILAYIG-


General information:
TITO was launched using:
RESULT:

Template: 3CXR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1282 -157700 -123.01 -641.05
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -123.01
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.416

(partial model without unconserved sides chains):
PDB file : Tito_3CXR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CXR-query.scw
PDB file : Tito_Scwrl_3CXR.pdb: