Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNFVHKTVNGLKSLLDEKGAIQLFCSEGDIMEFLVTFSPDKATLNDIQSFEAKHQLSLPEDYQKFITLHNGAKIFEILSDGENIGGGLQLFSLEEIEEELKYEDLFEGINGIPIGYLLEECHLMIDKDKINQGDPNYLYIFESGLEYNPLNLNFEIFLDRYILANGEPFWDWRYYTAENYYRTR
4NN3 Chain:A ((200-259))-TALQNGVVDGEENPLDTIQRMKFY----EVQKYLVT--SEHGAMEDYVLFNPSYWESLPENYQKII----------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4NN3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 89 -5629 -63.25 -93.82
target 2D structure prediction score : 0.23
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -63.25
2D Compatibility (Sec. Struct. Predict.) : 0.23
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.369

(partial model without unconserved sides chains):
PDB file : Tito_4NN3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NN3-query.scw
PDB file : Tito_Scwrl_4NN3.pdb: